The HPC Systems Administrator maintains a large number of scientific programs and packages.  All installed software is available via the environment modules system.  If you need an additional package installed, please complete this form.

Computational Chemistry
Gromacs
NAMD

Image Analysis
auto3dem
IMOD
PEET
RELION
Frealign
EMAN
EMAN2
ctffind

Linkage/Phylogenetics
BEAST

Mass Spectrometry
proteowizard

Mathematical/Statistics
Mathehmatica
Matlab
R

Molecular Modeling/Graphics
Chimera
Coot
Rosetta
VMD

Next-Generation Sequencing
breakdancer

Sequence Analysis
blast
clustalW

Structural Biology
CCP4
DSSP
Phenix
PROCHECK
ProFit
Pymol
VMD
Xplor-NIH

Systems Biology
aria2
grace
POVRay
Spark
swarm
tmux